Tools

The BGH proposes aseries of tools and unique interfaces are implemented to harness the potential of genomics in bananas such as:

• BLAST, JBrowse, advanced gene search and gene family analyses including multiple alignments and phylogenies.
• synteny viewer enables the comparison of genome structures between chromosome-scale assemblies.
• Interfaces for differential expression analyses, metabolic pathways and GO enrichment.
• catalogue of variants spanning the banana diversity is made available for exploration, filtering, and export to a wide variety of software.
• pangenome viewer to explore graphically gene presence-absence
• genome ancestry mosaics viewer targeting cultivated bananas.

All these tools are further described in this user manual.