Sequencing status

Sequencing status (Access link)

The amount of genomic resources in the Musaceae is regularly and steadily increasing in public databases such as NCBI. While we keep curating key resources in the Banana Genome Hub, we cannot store or capture all of them and it may require some time for processing. In addition, a number of new resources are  planned, ongoing or pending to publication and the information is not shared enogu so duplication of resources may occur.

To facilitate tracking and communication, we keep up to date a inventory of genomic resources.To add some resoruces and let other know about the status of any project, please contact us and we will update it.

At the moment, we have compiled the following resources

• Chloroplast - assembly
• Chloroplast - reads
• Genomic - RADseq
• Genomic - GBS
• Isoseq - reads
• RNAseq - reads
• RNAseq - assembly
• WGS - reads
• WGS - draft assembly
• WGS - Chromosome scale assembly

They can be associated with the followign status

• Planned: scheduled in a project with funding secured
• Ongoing: samples sent to sequencing equipment
• Not public yet: Data or final product stable but pending publication, public release
• Public: datasets described in publication or available in a public database

Nomenclature

For wild species, we propose recommendations for the locus tag nomenclature for any new genome sequenced.