Overview
NameMa00_t03840.1
Unique NameMa00_t03840.1
TypemRNA
OrganismMusa acuminata (DH Pahang)
Sequence length279
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chrUn_randomchromosomechrUn_random:31386512..31387168 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
manual_curation2015-04-05 .281687
Properties
Property NameValue
OriginRefSeq:rna44015
Previous locationchrUn_random:88210544..88211200
NoteUncharacterized protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID103974401
GenbankXM_009389223.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ma00_g03840Ma00_g03840Musa acuminatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ma00_p03840.1Ma00_p03840.1Musa acuminatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto2011648auto2011648Musa acuminataCDS
CDS-auto2011649auto2011649Musa acuminataCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto2011650auto2011650Musa acuminataexon
exon-auto2011651auto2011651Musa acuminataexon


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ma00_t03840.1 ID=Ma00_t03840.1|Name=Ma00_t03840.1|organism=Musa acuminata|type=mRNA|length=279bp
ATGGATGATGAGAGTAGGAAGGAAGGAGGAAGCAGCAGCAGCAGCACCGA
GGCCATGGCTATGGTGTTCGAGCTCCACAACGGAGAAGCTGATCTTGTGT
TCTGCGCGGTCATAATGTGGCTCTCCGTCATTTCCATCGTCATCTTTTCT
TCTGTGGGCGGTCCGAGCCAGCCGAGGCAGCGGTCCAGGGACAGCAGGCT
GGTGCTTCCCGGTGAGGCAGGTTGCAGGTGCGGCTGTTGCATCGGAGGCG
CCGGTGTTTGTGGCACTTATCTCTCCTGA
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protein sequence of Ma00_p03840.1

>Ma00_p03840.1 ID=Ma00_p03840.1|Name=Ma00_p03840.1|organism=Musa acuminata|type=polypeptide|length=93bp
MDDESRKEGGSSSSSTEAMAMVFELHNGEADLVFCAVIMWLSVISIVIFS
SVGGPSQPRQRSRDSRLVLPGEAGCRCGCCIGGAGVCGTYLS*
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mRNA from alignment at chrUn_random:31386512..31387168-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ma00_t03840.1 ID=Ma00_t03840.1|Name=Ma00_t03840.1|organism=Musa acuminata|type=mRNA|length=657bp|location=Sequence derived from alignment at chrUn_random:31386512..31387168- (Musa acuminata)
TCTGGTTCCCATGCAACACAAAAGGACGAGAGAAGAAGGCTTCATCTTCC TTGTTTACAGCCCCCCATGGATGATGAGAGTAGGTAGGTGTAACAACACA GCTAGATATGAAGCCTGCAATGCTATAGCTGCGGTCTAACGAAGTCTGCG CACAGGAAGGAAGGAGGAAGCAGCAGCAGCAGCACCGAGGCCATGGCTAT GGTGTTCGAGCTCCACAACGGAGAAGCTGATCTTGTGTTCTGCGCGGTCA TAATGTGGCTCTCCGTCATTTCCATCGTCATCTTTTCTTCTGTGGGCGGT CCGAGCCAGCCGAGGCAGCGGTCCAGGGACAGCAGGCTGGTGCTTCCCGG TGAGGCAGGTTGCAGGTGCGGCTGTTGCATCGGAGGCGCCGGTGTTTGTG GCACTTATCTCTCCTGATCTGATCTGGTGTAGGGTGGAGGACGATGACTC CTCCGGAGAACCGCACATCGATCACTTGCATTTCTTGCTTGTGCTCTTTC TCGTACATTTCTTTGTCTTCGGTTTGCTTTATCTCCTATTTAGTTCTCCA GTCTCCTTTCTTCTTCCTACGCAACGAAGCCTGTGAAGCTTCAGATGGGA AGAGAAGAACTTGTCACAGGTGAAGGTCTCGTTAAAAGACCGGCTAAAAG TATCCTC
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Coding sequence (CDS) from alignment at chrUn_random:31386512..31387168-

>Ma00_t03840.1 ID=Ma00_t03840.1|Name=Ma00_t03840.1|organism=Musa acuminata|type=CDS|length=279bp|location=Sequence derived from alignment at chrUn_random:31386512..31387168- (Musa acuminata)
ATGGATGATGAGAGTAGGAAGGAAGGAGGAAGCAGCAGCAGCAGCACCGA
GGCCATGGCTATGGTGTTCGAGCTCCACAACGGAGAAGCTGATCTTGTGT
TCTGCGCGGTCATAATGTGGCTCTCCGTCATTTCCATCGTCATCTTTTCT
TCTGTGGGCGGTCCGAGCCAGCCGAGGCAGCGGTCCAGGGACAGCAGGCT
GGTGCTTCCCGGTGAGGCAGGTTGCAGGTGCGGCTGTTGCATCGGAGGCG
CCGGTGTTTGTGGCACTTATCTCTCCTGA
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