Overview
NameMa00_t00210.1
Unique NameMa00_t00210.1
TypemRNA
OrganismMusa acuminata (musa)
Sequence length735
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chrUn_randomchromosomechrUn_random:207765..215303 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
manual_curation2015-04-05 .281687
Properties
Property NameValue
NotePlant cysteine oxidase 4
OriginRefSeq:rna8377
Old locus tagGSMUA_Achr3G15440_001
Old locus taggene6186
Previous locationchr3:16483830..16491368
Cross References
External references for this mRNA
DatabaseAccession
GeneID103978374
GenbankXM_009394150.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>Ma00_t00210.1 ID=Ma00_t00210.1|Name=Ma00_t00210.1|organism=Musa acuminata|type=mRNA|length=735bp
ATGCCTGCAATCAGAAGGTTATATGATGTCTGTAAAATATCATTCTCTGA
TAATGGACCTCTATCTGCTGAAGCCCTTGAACATGTTCGGTCTGTTTTAG
ATGATATCAAACCTTCTGATGTGGGACTTGAAGATGAGGCTCGGATAGCA
CGAGGGTGGAATGTTTCCACGCATGGTTCAAATGGAAGAAAAGGGCGTAA
TGGAAATAATCAGTACCTGCCTCCTATCAAGTATCTGCATATACATGAGT
GTGAAAGCTTTTCTATTGGGATATTTTGCATGCCACCTTCATCTGTTATT
CCACTTCATAACCATCCAGGAATGACTGTTCTTAGCAAACTTCTATATGG
GACAATGCTTGTCAAATCATATGACTGGGTAGATACAGTAGAACCCATTG
ATCCATCCAAAGCTCGACCAGCAAGGCTTGTTAGAGATGCTCAAATGTCA
GCCCCCTGTGGGACGACGATCCTTCATCCAACGAGTGGCGGAAACATTCA
TTCATTCAAAGCAATTACTCCTTGTGCTCTCTTCGATGTTCTATCACCCC
CATACTCGTCAAAAGATGGACGGGACTGCTCCTACTTCAAGATGTCTTCA
AAAAAAGATCTTTCCGGTGTTTTGCCTAGCGCAATAAGGTCTTCAGAAGT
GGCTTGGTTGGAAGAGTGCCAACCACCGGAGAGCTTTATCATCAGAAGAG
GGCCATACAGGGGCCAGATTGTTGATACTAGATGA
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protein sequence of Ma00_p00210.1

>Ma00_p00210.1 ID=Ma00_p00210.1|Name=Ma00_p00210.1|organism=Musa acuminata|type=polypeptide|length=245bp
MPAIRRLYDVCKISFSDNGPLSAEALEHVRSVLDDIKPSDVGLEDEARIA
RGWNVSTHGSNGRKGRNGNNQYLPPIKYLHIHECESFSIGIFCMPPSSVI
PLHNHPGMTVLSKLLYGTMLVKSYDWVDTVEPIDPSKARPARLVRDAQMS
APCGTTILHPTSGGNIHSFKAITPCALFDVLSPPYSSKDGRDCSYFKMSS
KKDLSGVLPSAIRSSEVAWLEECQPPESFIIRRGPYRGQIVDTR*
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mRNA from alignment at chrUn_random:207765..215303-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ma00_t00210.1 ID=Ma00_t00210.1|Name=Ma00_t00210.1|organism=Musa acuminata|type=mRNA|length=7539bp|location=Sequence derived from alignment at chrUn_random:207765..215303- (Musa acuminata)
CTCCCTCTCTCTCGATCGCTTCCCGGACATGAAGTGCCGCGCCGTGGTTA AACCCTGGCATGTAGGTAAGAATCGTGAACTGCTCACTGTTAGGGATTGG AGTTCGAATCTGTGTGGCGTCCGTTGGCCTCTTCTCGCTTCTTGACGATT GGACTGCTCGATCGGGTTCCTTTTTGGCTGCTGATGGATTGGAATTAACG CCTTGATTTGTTTTGGTTTGCCTGGTGATATTTGTTCTTGTGTTCTGTGG AATTCTCGAGGTTTGTCGATGATAGGTAGGGTTTCTGGCATCGTGGGATT CGGTGGTCGTTTGGGGTTGGAAAGGGGAGGATTATTTTGGTGATGTTGTG CGGTCACCGTTTGTGTGTGTTTTGCGCTGTTTGCGTTGGTGTTTATTGCA CCTTCTCTAGCTTTCTCCTTCGGTCTCGATATCCATGTCCTTTTTTTGCT CTTATAAATGAAGGGCCTTTTTTATTCTCTTACAAATGAATGACACCGAT CGATTGCCTTAGATAAAAGCATGGTCTCGAGAATTGGCCTGACAATTGTA GATACTGAATTATTTTTATTTAAAAGTGAAATCATATCCCATTCCATCTA TGCTTCTGTGATGAGATACAGAAATGCATTTGAGTTAAAATGAGAGAAAT AGTTGTCTTCATGAAAGGATTAATTAGATTGTGCTTTTTTTTTGGGTGAT TTTCCAAGAGCAACGGTTGATTGCATGGACATAAATGTAGTTTTTTTTAT CTTTACTTGATGCTGCAAGAACTTTAGCTTTAGATTACATGGACGATACA ACATGGATATTTGCCTTTTGGATTTGTAACCGAAGAGGGAAAGGTAACAG CTCAAGACTTTGGCACTCCTTGCCCGGAATGTCCAGCCCATTCATTTATC CCAAATATTCTCTATTTTCTTCTTCTTCGGGACATTTACTCCTATTCATC AACAGCAGCTAAATGTTAGGGCACACTACCATGTTTAGTGACTAATGAAT TATTCATTTAATGATCAATAACAGCCTATGCATGAGGATCTTTCTTTCTG CAGATCTGAGAGGGTTTACATAATATGCAGCCATACCCCTTCATGCATTG TCGCAGCTTCTGCCGTTCAAGCCTATGACCTCTGTGGTATAGAAGCACAA CCCATCAAATCATTTAAAAGTTAATAACTTCTAGGTGGAAGTTTGTGATA CGTTTTGTGAGGGATTCTACTGCTGACCCATGCCCAATGAATTCTTTTCA GTTAGCATCTTTGGCGGGTATGATAAAGTATGGTGTTAGATACAATTAGG ATATTAACAAAACACTTTAATAATATCAGGATATCATTTTTCTTTTTTCC ATTAAATAATGTTATGTAGGAGCAGCTATAGAGGCTGACAACCACCGATA GGTAATTAGGATTCATGATCCTTTTCATTTCATTTTTGTGGTCTTTAGAA GAGGCACTGAATTATAGGTAAAGCAACAAAGTGTGTTAAAGTTGTCAATG TCCACTGTGGACAACTAATCTCATAGCAGTTAGAATCAATGCTTTGACTG GCTGGCTTTTTTTTCCATTGGTTGTTGTTCATCTCTATTATTTATTTGCA ACTTACAAAGAAAGGCTCAATGCATAAGGTTTCTGCAGTTGCAGGGACTG CGGATTAGTTTTTTATATCTGCAGATTCCTTTTTTTTTTTGACAGAGATC AGTGAAGTAAATTGCTTGCCCAATATAAGCAATCTAGACACCGTATTTTA TCTTCTGATGAACTGAAACTTTTTTTAATTCCTTTTATATTGATGAACAG GGCTATGAAGTTTTGTACATCTTGAACAAGGTGATTTCAAATCATTGATT GATAATTTTTACCAGTTGAAGAATTGGTTGGTCGGTCTTTTGGTTACTTA ACCCTTCTTGCAGTATGCCTGCAATCAGAAGGTTATATGATGTCTGTAAA ATATCATTCTCTGATAATGGACCTCTATCTGCTGAAGCCCTTGAACATGT TCGGTCTGTTTTAGGTGAGTTCACTAACTTTTTTTTACTTACATCTTTGT TTGCATTTGTTAGTACAGAACTGTAATTACTATTTACTCTAATTGTCTAG TTGTTTCTAATAGTATGTACTGCAACAATATCATTTAATTTTATGAAACA TCTTGATATATAAATTATAACCTTTTGTAGAAAGTGTGTATTTATTAAAC TTATTAATTGCCTTTTCAGTGTTATATAATGTCATTCCTTTCTGAGATGT GTTGTTTAGGTGTGTTTTTATCACTCATGTTCAAGTCTCGTGTTTATGCA TATGTCCGCGATTACCGTATATTAGTTTGATTCTTTACGAAAAAATGATG TGAAACTTATATTGCATTAGTTTAACACACAATTTCAGTGTACAGGCTAG CTGTAGATCAAACAGCTATGCTTTCCACAGTAAACAGAGGTATTGAATGT AGCATGATACTGCTTGCTTTCATCACGTCCATTTTTTATGGCCTTAGATC TCTTGTTATATCCAAAATTTAGGATTATGGAATATGTTCATCAAAGCCTA GCCTTCCACAATATGTTAATGACAGGAAAATAGTAAGTTCAGAAGTATAG TCTCCTTTGAAGGCCTTGGAATTGTCAATCGTGAATAAATACTGTACTTG AGTAATAGTTCTGTCATGTTCTTGTTTGTCCTTGTAACAGTAATTGGAAG AATTTTGGTATTCGGTGCTCACAGAGCTCATGGATCTGAGAGACATGCTT GCTTTTGTATATGCTTTTGTTTGTTTGTTAGGTTAGTTTAGTTTAGTATG ACCAACTTTGTTCATTTGTATGGGCATTTGTTTAAAGCTGCTCCATTTTG TAGCTTATTTAAATGCAAGACACTTCCGTCTTCAGTTTAAGGTCCCCTCC CAACGCTCGCAATTTCACCTTTTTCAGATGATATCAAACCTTCTGATGTG GGACTTGAAGATGAGGCTCGGATAGCACGAGGGTGGAATGTTTCCACGCA TGGTTCAAATGGAAGAAAAGGGCGTAATGGAAATAATCAGTACCTGCCTC CTATCAAGTATCTGCATATACATGAGTGTGAAAGCTTTTCTGTAAGCATT TGATTCTTTGCAGGAGTAGGTTTTATATAATGTTGTTTTTGTCATGATTT GCTGCAACATTTGATCTTGTTCTAAGTATTTTTGTTTCATTGGCCTGAAC AAAGTGAAGTTAAGATTATCTTTTGAAGAATGACATTACAATAAAAACCT TAAGTGATTATGCCTTGGATGCTTTCTGATTACGATGCAGATTGGGATAT TTTGCATGCCACCTTCATCTGTTATTCCACTTCATAACCATCCAGGAATG ACTGTTCTTAGCAAACTTCTATATGGGACAATGCTTGTCAAATCATATGA CTGGGTAGATACAGTAGAACCCATTGATCCATCCAAAGGTATGTGAGCCT TTTCTCTATACTTCATTTAGCATTTCAATAAGTCAATTACAATGCCATTG GTTAACAGTGCTCATTTCACCGAATGTAGATTCATCTTATTGGGAGATGC TTTGCAATTGATGTAATTGTTTGCCTTTTCTTCACACACAAAACATCTAT TTGTATCCTATGTTTTTTGGTACAAGAAGTCAAGAAAATCTAAAATTTTC GATAAGCAGCAGGATTGACATATGCAGGTTAAGGTTACTTAACGATCATA ATAAAGTGATGTTGGGCTTTATGTATCATCAGCTTTAATAACATGACAAT GTTTCAAACATCTATAAGGAATGAAACTCTATAGTCAATATTGCAATCAA ATTTGCAAGCAACACTGAATAGAGATGGTAACACCCCACTGGTTGCACAT TGCATTACATGATAGTAGACAAGTTTGATAACCACAGATGATAAGCCTAA GATTTATGATAAGGAGATACGAGACACATCAAAAAGGTGTCATATATAAG ATGTATTATCATACTACAATGCTTGTAACATGCAGCTTCTCTTGCAGTTA TTGGTGAAACATTGAAAAGGAATAATTCTGAAGGTGTAGTTTCATCAGAA CTTTGGATCTTTATCAGCACATTAGGCACTTGATGGTTATTTGATGGATG AATCATAGAGCTGCACTGTTGTCAAGGATTAGATAAAAGAACATTTGTAC TTGACTAACTAGAAATAAGAAAGACATTTGATTCTAGCTTCTTTATTAAC AATGTGGAGCTCAGGAACGATTTAACGTTTCAAATAGTTGATTATCTGTC ATTGTCAAAGATTAGGTTAACTTTATTGGAGATAAAGCTAGAGAAGTAAA TTGCTCAAAATCATATTTCTCTGTGTTATATTCTTTCCTATGGTGTGGAA GTGCTGGGGATGACCTTCAAATCATGACTTCCCACCTTCATTAAGTATAT AAGTGTTTTGTCAATTTGTGATTTTGATGGAAGCAAGGTTGTCAAAAACT GCTTTCCTACCTAGGATAGTAAAGGGGTTGCAAACTCGAATCATAGGATC GAACCAGATCGTAAGATCCTATAAGTCATAAAAAATAATTTAAAGATACA TATTTAAAGAAATTTACAAATAATATTTTTGTTAAGATTTAGTAATTCTC ATATATTCTTAATCTAATAATTTATTTTTATTTAAGTTAATACATAATCT TTTATTTTGACGGATAATAGTTTTATTGCATGTACTTGCACTTAATTAGC TATGGTGGCTTTACATTGGCTACGACAAATCTACAGTGAACTTAATGTTA AATAGTTCAAGGTTACATGTTTATCTAGCAAACAACTGTACTTAATTTTT ATCCATCAAAGAAAAAGAGGAGAGGGTAGAGAGGAGAGATGAGAGAAGTC GGGGGAGGCGAGGAGAGAAAGAAGGGATGAAAGAAGAATAGAGAGGAGGA GAAGAGAAGGGAGAAGAGGAGACAGGAAGAGAGGGTAGGAGAGGAGAAGA TAGAAGAAGAGGGGAGGAGGAAATAGGAGATGAAAGGGGAAGAGAAGCTA GGAGAGGGGAAGAGAGGAGAAGAGATGGGAGAAGAGGGGAGGAGAAGAAA GGAGATGAGACGGGAAGAGATGGTAGGAGAGGGCAAGACGAGAAAAGATG GGAGGAGAACAAAGGAGAGGAGATGAGAAGAGAGGGGTGGCGAGGGGAGG AGAAATAATACTTGTGCACGAAAAGGAAGTGGTGATCATCGAGATGGGAG AAGAAGAAAGGAGAGGAGAAACAATACTTGTGGGTGAAGAGGAAGTAGTG ATCATTCTTGTCACTCCTATGCTTAGTAGTATGGACATGTGCTTTTGGTG TCCAAAAGTGTCGGACACATGTGACAGACACTCCCATGCAACATTGTGTG GCCCTCATGTGAGGGCCATATGATTCAATTTGGAGTTTGTCACAAGGAAA CATATATCAATTATATAAATATTATTTGATGTACTGAACCTTTCTTTTGG ATACTTAAATTTAGATGATTTTAATTGTTTCAACTTGTATGATGATATTT ATTTGTTCACATCGCTGAATTTATAAAATTTAACTATAAGTACTATAAAC TTCATGTTAATTGAATATTATATATACATATATATTAAAAAATACATGTG TCCTTTTTGTATTTGTGTCCTAATTTTTTTTAAAAATGGTGTGTTCTCTT GTCTGTGTCCCACGTCCATGCTTCTTAGCTCCTATGCTGCAAGGATGATA AACCAAGAATGGCCGGCAAGGCAAAACCCTCTCGACAATAGTGGTTTAGT ATTGTAGTTTAGGACTCTGTCTCGGCCAAGAATTGCTGCCACTTCAAAGT GAGTTCTTTTCTTTTCCCATTTATATAAAGCCAACTGAGTTGACCCAGTA AAGTAAGTCAACTAGTCCAAGTCAATCTATCTTACTGAGTCAACGCGTGT GTCAATCTGATTCTAGCCTGTTTACGATTCAATGACTGGTCCGACTTGCC ACGCTTGATTTGGATTTGCAATCCTATGACCCAGATCATGAGTTTAACAA CCTTCAATGGAAGTCATATTAATTCATATTTCTGATAAAGTTTATACAAG AGACATCTAGTACAATGACGCCTACGCATGATACTTTATAAATAACCAAG AATCTCCGACCAAAGTAATTAAACAGTATTTTTTAAGAAGATAAAAGAAT ATCAGATATCATTTACTCCTGTGATCTATATTGTCTGCAAAGAGCAATTT GCACCGATCAGAATGTGGATAATTGTGTGAACATCTCTTTAGTACCATAA TAGATGTGCACATGATAAGGTTGACCATGCCAACGGAGTTTGTGAGGGGA TATTAACAGAGACCATCAATAACAGTCATGGAATTATTATTGGACCCTAG AAACCTCAATCACATCTTATTTTTTGTCGAGAGGTGGGGGGAAGAAGATG GAGGAAGTTTAGATGGGAATCCTTTCGACTAACGTAAAGGATGCGTAGGA AATATCTTGTGTGCTGATGATCATATAACGTACAAATTTTAGCTGCTCTT TTGTAATGAGTTTTTGGATATATGGAGATCCCTTGAGAGTAATTATGTGG AGAAGTCTTTAAGAAACTTTCAGAATTTCTTGAGGGTAATTATGTGGAGA AGACTTTAAGAAACTTTCAGAATTTCTTGGAATAAAGTAAGATTACTCCT TTATGACTCGGAAGATTAGGATTGAATTATAGAACAATCCCTTTAAATAT AAAGATAAAACTACATATATTGATCCTTTCTAAACCCCACATTGGTGAAT CTCTAGATTTACCTTTTTTCTTTAAAAAAATTCGAACTAGTACCTTTATG AGTCTTTGTTGGATGCCATTATCTTTGTTTATTATATCATCACAAATTCC TTAACAAAGTTGTTGACTACTTGACAAATATTGTGAGAATCATTTATAAT TTATTTATTCAATCAATCTATAGACTCTAGATAATGAATAGTTTTTTTTT TTCGGTATTTTTATGATATTGGTGACTGAGATTGCGTTGTTGTAAAAGTA GGATTGTAGCGCCATCGATTTCAGATGACAATTGCATCCTTATAGACTTA ATCATGATAATGATTTGCAGCTCGACCAGCAAGGCTTGTTAGAGATGCTC AAATGTCAGCCCCCTGTGGGACGACGATCCTTCATCCAACGAGTGGCGGA AACATTCATTCATTCAAAGCAATTACTCCTTGTGCTCTCTTCGATGTTCT ATCACCCCCATACTCGTCAAAAGATGGACGGGACTGCTCCTACTTCAAGA TGTCTTCAAAAAAAGATCTTTCCGGTATAATCTCATATATCTAAAATATG CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTTTTTGCTTGTCAGT ATCATAATATGCCAATAAATGATTTTATTTGAATTCATTGAAGGTGTTTT GCCTAGCGCAATAAGGTCTTCAGAAGTGGCTTGGTTGGAAGAGTGCCAAC CACCGGAGAGCTTTATCATCAGAAGAGGGCCATACAGGGGCCAGATTGTT GATACTAGATGAATTAAATTTATAGCTCTTTTAATGATG
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Coding sequence (CDS) from alignment at chrUn_random:207765..215303-

>Ma00_t00210.1 ID=Ma00_t00210.1|Name=Ma00_t00210.1|organism=Musa acuminata|type=CDS|length=735bp|location=Sequence derived from alignment at chrUn_random:207765..215303- (Musa acuminata)
ATGCCTGCAATCAGAAGGTTATATGATGTCTGTAAAATATCATTCTCTGA
TAATGGACCTCTATCTGCTGAAGCCCTTGAACATGTTCGGTCTGTTTTAG
ATGATATCAAACCTTCTGATGTGGGACTTGAAGATGAGGCTCGGATAGCA
CGAGGGTGGAATGTTTCCACGCATGGTTCAAATGGAAGAAAAGGGCGTAA
TGGAAATAATCAGTACCTGCCTCCTATCAAGTATCTGCATATACATGAGT
GTGAAAGCTTTTCTATTGGGATATTTTGCATGCCACCTTCATCTGTTATT
CCACTTCATAACCATCCAGGAATGACTGTTCTTAGCAAACTTCTATATGG
GACAATGCTTGTCAAATCATATGACTGGGTAGATACAGTAGAACCCATTG
ATCCATCCAAAGCTCGACCAGCAAGGCTTGTTAGAGATGCTCAAATGTCA
GCCCCCTGTGGGACGACGATCCTTCATCCAACGAGTGGCGGAAACATTCA
TTCATTCAAAGCAATTACTCCTTGTGCTCTCTTCGATGTTCTATCACCCC
CATACTCGTCAAAAGATGGACGGGACTGCTCCTACTTCAAGATGTCTTCA
AAAAAAGATCTTTCCGGTGTTTTGCCTAGCGCAATAAGGTCTTCAGAAGT
GGCTTGGTTGGAAGAGTGCCAACCACCGGAGAGCTTTATCATCAGAAGAG
GGCCATACAGGGGCCAGATTGTTGATACTAGATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ma00_g00210Ma00_g00210Musa acuminatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ma00_p00210.1Ma00_p00210.1Musa acuminatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto2006543auto2006543Musa acuminataCDS
CDS-auto2006544auto2006544Musa acuminataCDS
CDS-auto2006545auto2006545Musa acuminataCDS
CDS-auto2006546auto2006546Musa acuminataCDS
CDS-auto2006547auto2006547Musa acuminataCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto2006548auto2006548Musa acuminataexon
exon-auto2006549auto2006549Musa acuminataexon
exon-auto2006550auto2006550Musa acuminataexon
exon-auto2006551auto2006551Musa acuminataexon
exon-auto2006552auto2006552Musa acuminataexon
exon-auto2006553auto2006553Musa acuminataexon
exon-auto2006554auto2006554Musa acuminataexon