Overview
NameMa00_t00050.2
Unique NameMa00_t00050.2
TypemRNA
OrganismMusa acuminata (DH Pahang)
Sequence length771
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chrUn_randomchromosomechrUn_random:52793..54446 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
manual_curation2015-04-05 .281687
Properties
Property NameValue
OriginRefSeq:rna43954
Old locus tagGSMUA_AchrUn_randomG17950_001
Old locus taggene32600
Previous locationchrUn_random:84890932..84892585
Noteexpressed protein
Cross References
External references for this mRNA
DatabaseAccession
GeneID103974355
GenbankXM_009389162.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>Ma00_t00050.2 ID=Ma00_t00050.2|Name=Ma00_t00050.2|organism=Musa acuminata|type=mRNA|length=771bp
ATGATACTTGAGAATTTTGTGGCTGCTTCCCTTCTTCTTCTTCTTCCTCT
TCTTCTTCCATGTGTGGGCTCACTGCGAGACACGCCTAGATTGGTCCAAA
GCCGCAGGAACGGCCAGCCGCCGAATCCTCTACAGCTGACACCCCAACTC
TCAACCCAGATCACTGTTCATGCATTCCTGCTCTGGGTTTCGGTTGGCTT
CCTGATGCCGGTTGGCATTATCATCATCAGAGTGTCCCACCGAGTCCACT
GCATCACAAAGCTCAAGGCTCTGTTCTACGCCCATGTCATCGTTCAGACC
GTGGCGATCCTGCTTGCAACTGCTGCCGCGGTTCTATCGGTAATCAACTT
CGAGAACTCCTTCAGCAACACCCATCAGAGGTTAGGAGCAGCACTGTACG
CGCTCATTTGGATTCAACCAGTGGTTGCCTTTCTCAGGCCTCACAGGGGA
ACGAAGCTTAGGGGGGTGTGGTACCTGCTGCACTGGCTGCTCGGGACCGG
AGTCTGCGTGCTGGGCGTCGCCAACGTCTACATCGGTCTGCACACGTACC
GAGAGAGAAGCTCGAGAAGTGTGAGCCTGTGGGCGTCTCTACTCACGGCG
GCGGTGTCGATCGTTGCCGTCGTCTATCTCTTGCAAGACAAATGGGAGTA
TCTGATGAAGCAAGCAAGGGTGGGAGATGAGCAGGTCACACCATCTCCTC
TCGGTGGCAGCCACAAGGAGTCAGAAATGAATCAATTATGGATGCCATGC
TTCTTTTACAAGCAGAAGTGA
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protein sequence of Ma00_p00050.2

>Ma00_p00050.2 ID=Ma00_p00050.2|Name=Ma00_p00050.2|organism=Musa acuminata|type=polypeptide|length=257bp
MILENFVAASLLLLLPLLLPCVGSLRDTPRLVQSRRNGQPPNPLQLTPQL
STQITVHAFLLWVSVGFLMPVGIIIIRVSHRVHCITKLKALFYAHVIVQT
VAILLATAAAVLSVINFENSFSNTHQRLGAALYALIWIQPVVAFLRPHRG
TKLRGVWYLLHWLLGTGVCVLGVANVYIGLHTYRERSSRSVSLWASLLTA
AVSIVAVVYLLQDKWEYLMKQARVGDEQVTPSPLGGSHKESEMNQLWMPC
FFYKQK*
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mRNA from alignment at chrUn_random:52793..54446-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ma00_t00050.2 ID=Ma00_t00050.2|Name=Ma00_t00050.2|organism=Musa acuminata|type=mRNA|length=1654bp|location=Sequence derived from alignment at chrUn_random:52793..54446- (Musa acuminata)
AGAGGTCTGAAATGGCCAGTGTTTGTTAGTTTGAGGAAGGAAGAAGGTAA AGAGGGTCGTAGCTCTCTTTGCAGTACATTCCCATTCGACTGATCTGTCC TTCTTTCCTAAGAGCATAGTGCATGTTCCCCCACATTACTTTATCTAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGACTCACCGTTTTCAGGAGTGTTGT TAGCCTGTGGAGGAGCTTGCAATTGTGATGATACTTGAGAATTTTGTGGC TGCTTCCCTTCTTCTTCTTCTTCCTCTTCTTCTTCCATGTGTGGGCTCAC TGCGAGACACGCCTAGATTGGTCCAAAGCCGCAGGAACGGCCAGCCGCCG AATCCTCTACAGGTATGCCATGGTAGTAATCTACTTTTGTTTCAGCAACG CAAGAGATACAAAGAAAGCTAACCTTCTCTTAGCCGTTGATGGTTCATCT CCTTACTGGACTCATAAAACCACTCGAGATCATCCCATCCTGAGACTCAC ATGATTGTGCAGCTGACACCCCAACTCTCAACCCAGATCACTGTTCATGC ATTCCTGCTCTGGGTTTCGGTTGGCTTCCTGATGCCGGTTGGCATTATCA TCATCAGAGTGTCCCACCGAGTCCACTGCATCACAAAGCTCAAGGCTCTG TTCTACGCCCATGTCATCGTTCAGGTCAGCAAACTCTTTCTTCTACATGC TGAATTCCCGACACAGCTACCAGCAGCCGTAAGTAATAAAACGTCGATAA TACGAACCGGCAGACCGTGGCGATCCTGCTTGCAACTGCTGCCGCGGTTC TATCGGTAATCAACTTCGAGAACTCCTTCAGCAACACCCATCAGAGGTTA GGAGCAGCACTGTACGCGCTCATTTGGATTCAACCAGTGGTTGCCTTTCT CAGGCCTCACAGGTATGACATGCAATTGAGGACTGTTCTTGCTCCACGTG CAAGCTTGGGAGACTCGTACCCAAATCCATCCTGCTGTATTCGTCTCAGG GGAACGAAGCTTAGGGGGGTGTGGTACCTGCTGCACTGGCTGCTCGGGAC CGGAGTCTGCGTGCTGGGCGTCGCCAACGTCTACATCGGTCTGCACACGT ACCGAGAGAGAAGCTCGAGAAGTGTGAGCCTGTGGGCGTCTCTACTCACG GCGGCGGTGTCGATCGTTGCCGTCGTCTATCTCTTGCAAGACAAATGGGA GTATCTGATGAAGCAAGCAAGGGTGGGAGATGAGCAGGTCACACCATCTC CTCTCGGTGGCAGCCACAAGGAGTCAGAAATGGTGTCGTAGATTTTGCTT CCTTCTCTAAAATTTACGATGCCTTTAGATCCTTTTAATTGAAATCTACT CTAGATTGTAAACCAAGTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTATA TATATATATATATATATATATATATATATATATAGTGAGAATGATGTGCA CCTCATAGATCATAACCAAGTTGGCAGATCTCCAAGCCAAACTCTGCAAA CCGTTCTCATCTTCAAACAATCTTTTTCTTGTTCTTTGAAAGTCAAGGAG AGGAGAACAAAAAACAACAACAATTATTTGAGGTTTCCTCTGACTTTTTA CTCTTCCTGCAGAATCAATTATGGATGCCATGCTTCTTTTACAAGCAGAA GTGA
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Coding sequence (CDS) from alignment at chrUn_random:52793..54446-

>Ma00_t00050.2 ID=Ma00_t00050.2|Name=Ma00_t00050.2|organism=Musa acuminata|type=CDS|length=771bp|location=Sequence derived from alignment at chrUn_random:52793..54446- (Musa acuminata)
ATGATACTTGAGAATTTTGTGGCTGCTTCCCTTCTTCTTCTTCTTCCTCT
TCTTCTTCCATGTGTGGGCTCACTGCGAGACACGCCTAGATTGGTCCAAA
GCCGCAGGAACGGCCAGCCGCCGAATCCTCTACAGCTGACACCCCAACTC
TCAACCCAGATCACTGTTCATGCATTCCTGCTCTGGGTTTCGGTTGGCTT
CCTGATGCCGGTTGGCATTATCATCATCAGAGTGTCCCACCGAGTCCACT
GCATCACAAAGCTCAAGGCTCTGTTCTACGCCCATGTCATCGTTCAGACC
GTGGCGATCCTGCTTGCAACTGCTGCCGCGGTTCTATCGGTAATCAACTT
CGAGAACTCCTTCAGCAACACCCATCAGAGGTTAGGAGCAGCACTGTACG
CGCTCATTTGGATTCAACCAGTGGTTGCCTTTCTCAGGCCTCACAGGGGA
ACGAAGCTTAGGGGGGTGTGGTACCTGCTGCACTGGCTGCTCGGGACCGG
AGTCTGCGTGCTGGGCGTCGCCAACGTCTACATCGGTCTGCACACGTACC
GAGAGAGAAGCTCGAGAAGTGTGAGCCTGTGGGCGTCTCTACTCACGGCG
GCGGTGTCGATCGTTGCCGTCGTCTATCTCTTGCAAGACAAATGGGAGTA
TCTGATGAAGCAAGCAAGGGTGGGAGATGAGCAGGTCACACCATCTCCTC
TCGGTGGCAGCCACAAGGAGTCAGAAATGAATCAATTATGGATGCCATGC
TTCTTTTACAAGCAGAAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Ma00_g00050Ma00_g00050Musa acuminatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Ma00_p00050.2Ma00_p00050.2Musa acuminatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS-auto2006401auto2006401Musa acuminataCDS
CDS-auto2006402auto2006402Musa acuminataCDS
CDS-auto2006403auto2006403Musa acuminataCDS
CDS-auto2006404auto2006404Musa acuminataCDS
CDS-auto2006405auto2006405Musa acuminataCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-auto2006406auto2006406Musa acuminataexon
exon-auto2006407auto2006407Musa acuminataexon
exon-auto2006408auto2006408Musa acuminataexon
exon-auto2006409auto2006409Musa acuminataexon
exon-auto2006410auto2006410Musa acuminataexon