Summary
Name
Orthofinder
Description

OrthoFinder is a fast, accurate and comprehensive platform for comparative genomics. It finds orthogroups and orthologs, infers rooted gene trees for all orthogroups and identifies all of the gene duplication events in those gene trees. It also infers a rooted species tree for the species being analysed and maps the gene duplication events from the gene trees to branches in the species tree. OrthoFinder also provides comprehensive statistics for comparative genomic analyses.

Program, Pipeline, Workflow or Method Name
Diamond, mafft, fasttree
Program Version
2.3.3
Algorithm
Organism
Date Performed
Monday, November 11, 2019 - 09:32
Data Source
Annotations
This record has the following annotations.
TermNameDefinition
There are no annotations of this type
Cross Reference
There are no cross references.
Publication
Emms DM, Kelly S. OrthoFinder: phylogenetic orthology inference for comparative genomics.. Genome biology. 2019 11 14; 20(1):238.